BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007G08SP1|AL425760
(744 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1205 1464 0.0
>3x_Contig1205
Length = 5507
Score = 1464 bits (736), Expect = 0.0
Identities = 740/744 (99%)
Strand = Plus / Minus
Query: 1 tgaaagaacatgatcggttgcwacagaactgaacctgaatatataggaatgawatgttat 60
||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||
Sbjct: 3125 tgaaagaacatgatcggttgcaacagaactgaacctgaatatataggaatgaaatgttat 3066
Query: 61 ataaaggttttcaaagaacaggatgtttttcgttcaaagattattggtcgttggtattcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3065 ataaaggttttcaaagaacaggatgtttttcgttcaaagattattggtcgttggtattcg 3006
Query: 121 atcgacatgtttagagaagagttttattgcatcttttgtcccattggtatctcgaaacag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3005 atcgacatgtttagagaagagttttattgcatcttttgtcccattggtatctcgaaacag 2946
Query: 181 tgtaaacattaactgattcttttagtttactctaattcttctagtttagatagagctaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2945 tgtaaacattaactgattcttttagtttactctaattcttctagtttagatagagctaat 2886
Query: 241 ttgaactatcattcgacatatatacaaaaggacaattaccaaatttgaaacgtcgtagga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2885 ttgaactatcattcgacatatatacaaaaggacaattaccaaatttgaaacgtcgtagga 2826
Query: 301 gtatggttaaggacactaaattatatgatttgctaggaatttcgcctagtgcaggtgaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2825 gtatggttaaggacactaaattatatgatttgctaggaatttcgcctagtgcaggtgaag 2766
Query: 361 ccgagattaawawagggtacagaaaggctgccttgaagtatcatccagataagcctacag 420
|||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2765 ccgagattaaaaaagggtacagaaaggctgccttgaagtatcatccagataagcctacag 2706
Query: 421 gtgacactgagaagtttaaagaaatctctgaggcttttgagattctttcagatgctcaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2705 gtgacactgagaagtttaaagaaatctctgaggcttttgagattctttcagatgctcaga 2646
Query: 481 agagggaagtttacgatacttatggtctagaggctgctcgtggtaatgctcctcaatttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2645 agagggaagtttacgatacttatggtctagaggctgctcgtggtaatgctcctcaatttg 2586
Query: 541 gaggagcgggagggcctggtgggcctggtgggcctggaggattttcttctggtgggtttg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2585 gaggagcgggagggcctggtgggcctggtgggcctggaggattttcttctggtgggtttg 2526
Query: 601 ccgggggacatgcgttctcacaagatgacgctttcaacatcttttcacagttctttggtg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2525 ccgggggacatgcgttctcacaagatgacgctttcaacatcttttcacagttctttggtg 2466
Query: 661 gaggaggtgctgccggaggtgcttctccatttggattctctgctagcggcgggtctggtg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2465 gaggaggtgctgccggaggtgcttctccatttggattctctgctagcggcgggtctggtg 2406
Query: 721 atgatttcgggtttggaggcagta 744
||||||||||||||||||||||||
Sbjct: 2405 atgatttcgggtttggaggcagta 2382
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5109
Number of Sequences: 1807
Number of extensions: 5109
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 744
length of database: 10,358,551
effective HSP length: 16
effective length of query: 728
effective length of database: 10,329,639
effective search space: 7519977192
effective search space used: 7519977192
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)